Observed arrival · 2026-09-28

Research Refined’s scientific software workbench

researchrefinedsoftware.com Visit website

Editorial interest 68/100 Selection signal · not a rating of the site

A project site for scientific applications focused on microbiome analysis and phylogenetic tree workflows.

Landing page captured for the 2026-09-28 issue.

For: Researchers working with microbiome data or phylogenetic trees
Worth noticing: Microbiome Workbench lists two required SILVA 138.2 files; its current release is not yet published.

Field notes

The application descriptions name specific reference materials: Microbiome Workbench lists SILVA 138.2 taxonomy training and species-assignment files, while PhyloForge lists an SSU Ref NR99 FASTA and taxonomy map. The guide topics include installation, processing, taxonomy, diversity analysis, figures, and troubleshooting. A page notice says the current Microbiome Workbench release has not been published, and several additional tools and tutorials remain marked as coming soon.

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